Publications
2024
Gözde F., Landuzzi F., Brambilla A., Charrance D., Furia F., Trova S., Peracino A., Camenisch G., Waldvogel D., Howard-McCombe J., Spelorzi Y., Henzen E., Bernagozzi A., Coppe A., Christille J.M., Vecchi M., Vozzi D., Cavalli A., Bassano B., Gustincich S., Croll D., Pandolfini L., Grossen C.
A highly contiguous reference genome for the Alpine ibex (Capra ibex)
bioRxiv
Article
Journal
2024
Abate C., Decherchi S., Cavalli A.
AMCG: a graph dual atomic-molecular conditional molecular generator
Machine Learning: Science and Technology, vol. 5, (no. 3)
2024
Myers S.H., Poppi L., Rinaldi F., Veronesi M., Ciamarone A., Previtali V., Bagnolini G., Schipani F., Ortega Martinez J.A., Girotto S., Di Stefano G., Farabegoli F., Walsh N., De Franco F., Roberti M., Cavalli A.
An 19F NMR fragment-based approach for the discovery and development of BRCA2-RAD51 inhibitors to pursuit synthetic lethality in combination with PARP inhibition in pancreatic cancer
European Journal of Medicinal Chemistry, vol. 265
2024
Balboni B., Marotta R., Rinaldi F., Milordini G., Varignani G., Girotto S., Cavalli A.
An integrative structural study of the human full-length RAD52 at 2.2 Å resolution
Communications Biology, vol. 7, (no. 1)
2024
Ghidini A., Serra E., Decherchi S., Cavalli A.
Bidirectional path-based non-equilibrium simulations for binding free energy
Molecular Physics
2024
Rocutto L., Maronese M., Dragoni D., Cavalli A., Cavazzoni C.
Comparing Adiabatic Quantum Computers for satellite images feature extraction
Future Generation Computer Systems, vol. 159, pp. 105-113
2024
Bassi P.R.A.S., Decherchi S., Cavalli A.
Faster ISNet for Background Bias Mitigation on Deep Neural Networks
IEEE Access
2024
Balboni B., Marotta R., Rinaldi F., Milordini G., Varignani G., Girotto S., Cavalli A.
Human full-length RAD52 at 2.2 Å resolution: an integrative structural biology study
Communications Biology
Article
Journal
2024
Bassi P.R.A.S., Dertkigil S.S.J., Cavalli A.
Improving deep neural network generalization and robustness to background bias via layer-wise relevance propagation optimization
Nature Communications, vol. 15, (no. 1)
2024
Previtali V., Bagnolini G., Ciamarone A., Ferrandi G., Rinaldi F., Myers S.H., Roberti M., Cavalli A.
New Horizons of Synthetic Lethality in Cancer: Current Development and Future Perspectives
Journal of Medicinal Chemistry
2024
Martire S., Decherchi S., Cavalli A.
OBIWAN: An Element-Wise Scalable Feed-Forward Neural Network Potential
Journal of Chemical Theory and Computation
2023
Rocutto L., Maronese M., Traversa F.L., Decherchi S., Cavalli A.
Assessing the Effectiveness of Non-Turing Computing Paradigms
IEEE Access, vol. 11, pp. 98751-98763
2023
Basagni F., Ortega J.A., Bertozzi S.M., Armirotti A., Summa M., Bertorelli R., Bartolini M., Mellor I.R., Bedeschi M., Bottegoni G., Lembo V., Minarini A., Cavalli A., Rosini M.
Galantamine-memantine hybrids for Alzheimer's disease: The influence of linker rigidity in biological activity and pharmacokinetic properties
European Journal of Medicinal Chemistry, vol. 261
2023
Abate C., Decherchi S., Cavalli A.
Graph neural networks for conditional de novo drug design
Wiley Interdisciplinary Reviews: Computational Molecular Science, vol. 13, (no. 4)
2023
Balboni B., Masi M., Rocchia W., Girotto S., Cavalli A.
GSK-3β Allosteric Inhibition: A Dead End or a New Pharmacological Frontier?
International Journal of Molecular Sciences, vol. 24, (no. 8)